Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Clk1P22518 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC10.79□□□□□ -0.68
Clk1P22518 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Clk1P22518 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Clk1P22518 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Clk1P22518 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Clk1P22518 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.78□□□□□ -0.68
Clk1P22518 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Clk1P22518 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC10.78□□□□□ -0.68
Clk1P22518 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC10.78□□□□□ -0.68
Clk1P22518 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC10.78□□□□□ -0.68
Clk1P22518 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.78□□□□□ -0.68
Clk1P22518 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.78□□□□□ -0.68
Clk1P22518 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Clk1P22518 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.78□□□□□ -0.68
Clk1P22518 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Gm9192-201ENSMUST00000183221 985 ntBASIC10.78□□□□□ -0.68
Clk1P22518 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.78□□□□□ -0.68
Clk1P22518 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.78□□□□□ -0.68
Clk1P22518 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Gm9257-201ENSMUST00000221254 232 ntBASIC10.78□□□□□ -0.68
Clk1P22518 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.78□□□□□ -0.68
Clk1P22518 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Clk1P22518 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.78□□□□□ -0.68
Clk1P22518 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clk1P22518 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Clk1P22518 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.68
Clk1P22518 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Clk1P22518 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.77□□□□□ -0.68
Clk1P22518 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clk1P22518 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Clk1P22518 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.77□□□□□ -0.69
Clk1P22518 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Gm23949-201ENSMUST00000104027 127 ntBASIC10.77□□□□□ -0.69
Clk1P22518 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Clk1P22518 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.77□□□□□ -0.69
Clk1P22518 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Clk1P22518 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Clk1P22518 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Gm37666-201ENSMUST00000194110 866 ntBASIC10.77□□□□□ -0.69
Clk1P22518 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Gm26448-201ENSMUST00000082446 203 ntBASIC10.77□□□□□ -0.69
Clk1P22518 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms