Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.13□□□□□ -0.47
TnfP06804 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.13□□□□□ -0.47
TnfP06804 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.13□□□□□ -0.47
TnfP06804 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TnfP06804 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TnfP06804 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.12□□□□□ -0.47
TnfP06804 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TnfP06804 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.12□□□□□ -0.47
TnfP06804 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.12□□□□□ -0.47
TnfP06804 Gm15617-201ENSMUST00000118973 771 ntBASIC12.12□□□□□ -0.47
TnfP06804 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.12□□□□□ -0.47
TnfP06804 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.12□□□□□ -0.47
TnfP06804 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.12□□□□□ -0.47
TnfP06804 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.12□□□□□ -0.47
TnfP06804 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.12□□□□□ -0.47
TnfP06804 Gm43058-201ENSMUST00000197645 625 ntBASIC12.12□□□□□ -0.47
TnfP06804 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.12□□□□□ -0.47
TnfP06804 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.12□□□□□ -0.47
TnfP06804 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.12□□□□□ -0.47
TnfP06804 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.12□□□□□ -0.47
TnfP06804 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.12□□□□□ -0.47
TnfP06804 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.12□□□□□ -0.47
TnfP06804 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TnfP06804 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TnfP06804 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TnfP06804 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TnfP06804 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
TnfP06804 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.11□□□□□ -0.47
TnfP06804 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TnfP06804 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TnfP06804 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
TnfP06804 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.11□□□□□ -0.47
TnfP06804 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.11□□□□□ -0.47
TnfP06804 Gm10169-201ENSMUST00000121822 348 ntBASIC12.11□□□□□ -0.47
TnfP06804 Gm16397-201ENSMUST00000122201 494 ntBASIC12.11□□□□□ -0.47
TnfP06804 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.11□□□□□ -0.47
TnfP06804 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TnfP06804 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Gm25554-201ENSMUST00000158075 113 ntBASIC12.11□□□□□ -0.47
TnfP06804 Gm44323-201ENSMUST00000198689 129 ntBASIC12.11□□□□□ -0.47
TnfP06804 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.11□□□□□ -0.47
TnfP06804 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TnfP06804 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TnfP06804 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.11□□□□□ -0.47
TnfP06804 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
TnfP06804 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.11□□□□□ -0.47
TnfP06804 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.11□□□□□ -0.47
TnfP06804 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TnfP06804 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms