Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Gm26013-201ENSMUST00000104404 119 ntBASIC14.26□□□□□ -0.13
Cfdp1O88271 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.26□□□□□ -0.13
Cfdp1O88271 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.26□□□□□ -0.13
Cfdp1O88271 Gm13182-201ENSMUST00000122241 312 ntBASIC14.26□□□□□ -0.13
Cfdp1O88271 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.26□□□□□ -0.13
Cfdp1O88271 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.26□□□□□ -0.13
Cfdp1O88271 Gm29164-201ENSMUST00000185454 1024 ntBASIC14.26□□□□□ -0.13
Cfdp1O88271 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.26□□□□□ -0.13
Cfdp1O88271 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Gm43966-201ENSMUST00000203301 612 ntBASIC14.26□□□□□ -0.13
Cfdp1O88271 Gm45856-201ENSMUST00000212752 416 ntBASIC14.26□□□□□ -0.13
Cfdp1O88271 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cfdp1O88271 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cfdp1O88271 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfdp1O88271 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm13422-201ENSMUST00000118834 504 ntBASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm16219-201ENSMUST00000120096 274 ntBASIC14.25□□□□□ -0.13
Cfdp1O88271 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm27438-201ENSMUST00000183480 110 ntBASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm37284-201ENSMUST00000193607 539 ntBASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.25□□□□□ -0.13
Cfdp1O88271 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfdp1O88271 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cfdp1O88271 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Gm44755-201ENSMUST00000207830 2102 ntBASIC14.24□□□□□ -0.13
Cfdp1O88271 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.24□□□□□ -0.13
Cfdp1O88271 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Gm24398-201ENSMUST00000157870 109 ntBASIC14.24□□□□□ -0.13
Cfdp1O88271 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Gm34023-201ENSMUST00000195539 217 ntBASIC14.24□□□□□ -0.13
Cfdp1O88271 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.24□□□□□ -0.13
Cfdp1O88271 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.24□□□□□ -0.13
Cfdp1O88271 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Rgr-203ENSMUST00000225070 4704 ntBASIC14.24□□□□□ -0.13
Cfdp1O88271 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.24□□□□□ -0.13
Cfdp1O88271 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfdp1O88271 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cfdp1O88271 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms