Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Gm12857-201ENSMUST00000117678 592 ntBASIC13.58□□□□□ -0.24
Smarce1O54941 Gm7150-201ENSMUST00000122032 981 ntBASIC13.58□□□□□ -0.24
Smarce1O54941 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarce1O54941 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Smarce1O54941 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarce1O54941 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Gm43758-201ENSMUST00000199500 367 ntBASIC13.58□□□□□ -0.24
Smarce1O54941 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Gm8913-201ENSMUST00000209491 641 ntBASIC13.58□□□□□ -0.24
Smarce1O54941 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Smarce1O54941 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smarce1O54941 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC13.58□□□□□ -0.24
Smarce1O54941 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarce1O54941 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.58□□□□□ -0.24
Smarce1O54941 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smarce1O54941 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.57□□□□□ -0.24
Smarce1O54941 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Smarce1O54941 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.57□□□□□ -0.24
Smarce1O54941 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.57□□□□□ -0.24
Smarce1O54941 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.57□□□□□ -0.24
Smarce1O54941 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.57□□□□□ -0.24
Smarce1O54941 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Smarce1O54941 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.57□□□□□ -0.24
Smarce1O54941 Gm20495-201ENSMUST00000173902 235 ntBASIC13.57□□□□□ -0.24
Smarce1O54941 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Smarce1O54941 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.57□□□□□ -0.24
Smarce1O54941 Gm3332-201ENSMUST00000189337 928 ntBASIC13.57□□□□□ -0.24
Smarce1O54941 Gm5714-201ENSMUST00000197343 566 ntBASIC13.57□□□□□ -0.24
Smarce1O54941 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smarce1O54941 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarce1O54941 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Gm9466-201ENSMUST00000218144 2246 ntBASIC13.57□□□□□ -0.24
Smarce1O54941 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.57□□□□□ -0.24
Smarce1O54941 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smarce1O54941 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Smarce1O54941 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarce1O54941 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Smarce1O54941 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarce1O54941 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarce1O54941 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Gm23596-201ENSMUST00000104304 132 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Gm25890-201ENSMUST00000177643 165 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Gm22614-201ENSMUST00000178300 165 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Gm27320-201ENSMUST00000184892 109 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Gm38151-201ENSMUST00000195085 289 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Gm43822-201ENSMUST00000200285 476 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Gm45433-201ENSMUST00000209386 247 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarce1O54941 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarce1O54941 Gm22042-201ENSMUST00000082989 165 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Gm26110-201ENSMUST00000083971 165 ntBASIC13.56□□□□□ -0.24
Smarce1O54941 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarce1O54941 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms