Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.57□□□□□ -0.56
ChkaO54804 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.57□□□□□ -0.56
ChkaO54804 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
ChkaO54804 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
ChkaO54804 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.57□□□□□ -0.56
ChkaO54804 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
ChkaO54804 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
ChkaO54804 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
ChkaO54804 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
ChkaO54804 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
ChkaO54804 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
ChkaO54804 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
ChkaO54804 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
ChkaO54804 Mir877-201ENSMUST00000104738 85 ntBASIC11.56□□□□□ -0.56
ChkaO54804 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
ChkaO54804 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.56□□□□□ -0.56
ChkaO54804 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.56□□□□□ -0.56
ChkaO54804 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
ChkaO54804 Gm8459-201ENSMUST00000162504 760 ntBASIC11.56□□□□□ -0.56
ChkaO54804 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Gm8815-201ENSMUST00000173809 620 ntBASIC11.56□□□□□ -0.56
ChkaO54804 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.56□□□□□ -0.56
ChkaO54804 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.56□□□□□ -0.56
ChkaO54804 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.56□□□□□ -0.56
ChkaO54804 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.56□□□□□ -0.56
ChkaO54804 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
ChkaO54804 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
ChkaO54804 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.56□□□□□ -0.56
ChkaO54804 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.56□□□□□ -0.56
ChkaO54804 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
ChkaO54804 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ChkaO54804 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.55□□□□□ -0.56
ChkaO54804 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
ChkaO54804 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.55□□□□□ -0.56
ChkaO54804 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Gm12196-201ENSMUST00000120954 262 ntBASIC11.55□□□□□ -0.56
ChkaO54804 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
ChkaO54804 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.55□□□□□ -0.56
ChkaO54804 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Gm16505-201ENSMUST00000179981 232 ntBASIC11.55□□□□□ -0.56
ChkaO54804 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.55□□□□□ -0.56
ChkaO54804 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.55□□□□□ -0.56
ChkaO54804 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.55□□□□□ -0.56
ChkaO54804 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.55□□□□□ -0.56
ChkaO54804 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ChkaO54804 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.55□□□□□ -0.56
ChkaO54804 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.55□□□□□ -0.56
ChkaO54804 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.55□□□□□ -0.56
ChkaO54804 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ChkaO54804 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.55□□□□□ -0.56
ChkaO54804 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ChkaO54804 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms