Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.99□□□□□ -0.81
Atf6bO35451 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.99□□□□□ -0.81
Atf6bO35451 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.99□□□□□ -0.81
Atf6bO35451 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Atf6bO35451 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Atf6bO35451 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Atf6bO35451 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Atf6bO35451 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Atf6bO35451 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Atf6bO35451 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Atf6bO35451 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Atf6bO35451 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.98□□□□□ -0.81
Atf6bO35451 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Atf6bO35451 Gm23251-201ENSMUST00000103773 110 ntBASIC9.98□□□□□ -0.81
Atf6bO35451 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.98□□□□□ -0.81
Atf6bO35451 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.98□□□□□ -0.81
Atf6bO35451 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Atf6bO35451 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.98□□□□□ -0.81
Atf6bO35451 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.98□□□□□ -0.81
Atf6bO35451 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.98□□□□□ -0.81
Atf6bO35451 Gm43138-201ENSMUST00000199123 708 ntBASIC9.98□□□□□ -0.81
Atf6bO35451 Gm6450-201ENSMUST00000200896 574 ntBASIC9.98□□□□□ -0.81
Atf6bO35451 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.98□□□□□ -0.81
Atf6bO35451 Gm1821-202ENSMUST00000227415 750 ntBASIC9.98□□□□□ -0.81
Atf6bO35451 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Atf6bO35451 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Atf6bO35451 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Atf6bO35451 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Atf6bO35451 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Atf6bO35451 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Atf6bO35451 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Atf6bO35451 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.97□□□□□ -0.81
Atf6bO35451 Gm13263-201ENSMUST00000121271 838 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.97□□□□□ -0.81
Atf6bO35451 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.97□□□□□ -0.81
Atf6bO35451 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.97□□□□□ -0.81
Atf6bO35451 Gm28937-201ENSMUST00000185413 695 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Gm29400-201ENSMUST00000187208 695 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Gm28662-201ENSMUST00000188446 695 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Gm28251-201ENSMUST00000188835 695 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Gm37318-201ENSMUST00000194325 695 ntBASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms