Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd3B1AR17 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.21□□□□□ -0.62
Chd3B1AR17 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd3B1AR17 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd3B1AR17 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd3B1AR17 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd3B1AR17 Gm25766-201ENSMUST00000104101 131 ntBASIC11.21□□□□□ -0.62
Chd3B1AR17 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Chd3B1AR17 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.21□□□□□ -0.62
Chd3B1AR17 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.21□□□□□ -0.62
Chd3B1AR17 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd3B1AR17 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Chd3B1AR17 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Chd3B1AR17 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd3B1AR17 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd3B1AR17 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Chd3B1AR17 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.2□□□□□ -0.62
Chd3B1AR17 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm19587-201ENSMUST00000191395 545 ntBASIC11.2□□□□□ -0.62
Chd3B1AR17 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm44008-201ENSMUST00000204345 412 ntBASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.2□□□□□ -0.62
Chd3B1AR17 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm12247-201ENSMUST00000117585 670 ntBASIC11.2□□□□□ -0.62
Chd3B1AR17 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.2□□□□□ -0.62
Chd3B1AR17 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd3B1AR17 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chd3B1AR17 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Chd3B1AR17 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.19□□□□□ -0.62
Chd3B1AR17 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.19□□□□□ -0.62
Chd3B1AR17 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms