Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Gm11941-201ENSMUST00000119904 610 ntBASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Gm45575-201ENSMUST00000210283 548 ntBASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Gm7848-201ENSMUST00000210739 718 ntBASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Gm7940-201ENSMUST00000218195 769 ntBASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Prpf40aQ9R1C7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm14058-201ENSMUST00000116082 735 ntBASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm16570-201ENSMUST00000161951 436 ntBASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm25732-201ENSMUST00000175168 60 ntBASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm5733-201ENSMUST00000190232 939 ntBASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm6312-201ENSMUST00000204060 1194 ntBASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Prpf40aQ9R1C7 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf40aQ9R1C7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf40aQ9R1C7 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf40aQ9R1C7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf40aQ9R1C7 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.65□□□□□ -0.38
Prpf40aQ9R1C7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf40aQ9R1C7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf40aQ9R1C7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf40aQ9R1C7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms