Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm14071-201ENSMUST00000117817 509 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm14395-201ENSMUST00000120494 563 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm23218-201ENSMUST00000158124 276 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm43163-201ENSMUST00000196571 442 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm42816-201ENSMUST00000198433 325 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm30671-201ENSMUST00000214898 318 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim54Q9ERP3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gm14219-201ENSMUST00000120414 288 ntBASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gm25492-201ENSMUST00000157383 129 ntBASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gm22877-201ENSMUST00000175451 105 ntBASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gm5298-201ENSMUST00000201122 892 ntBASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.42□□□□□ -0.42
Trim54Q9ERP3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms