Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm23251-201ENSMUST00000103773 110 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm26286-201ENSMUST00000104166 134 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm24891-201ENSMUST00000104391 136 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm13408-201ENSMUST00000119822 798 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm13935-201ENSMUST00000121859 798 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm5523-201ENSMUST00000180415 997 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm9211-201ENSMUST00000182882 975 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm45118-201ENSMUST00000208928 825 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Ntng1-201ENSMUST00000051253 327 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tubb3Q9ERD7 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.4□□□□□ -0.59
Tubb3Q9ERD7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Tubb3Q9ERD7 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.4□□□□□ -0.59
Tubb3Q9ERD7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tubb3Q9ERD7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tubb3Q9ERD7 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm12165-201ENSMUST00000117047 342 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm11509-201ENSMUST00000117358 325 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm7851-201ENSMUST00000117574 323 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm23085-201ENSMUST00000157849 293 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm28686-201ENSMUST00000187404 609 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm6905-201ENSMUST00000205729 511 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm10288-201ENSMUST00000084614 537 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms