Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm37301-201ENSMUST00000195412 568 ntBASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Hmgn3Q9DCB1 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Gm8738-201ENSMUST00000172606 329 ntBASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn3Q9DCB1 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm7809-201ENSMUST00000153199 742 ntBASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm6222-202ENSMUST00000182143 629 ntBASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm3890-201ENSMUST00000182416 207 ntBASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn3Q9DCB1 Gm6266-201ENSMUST00000203844 806 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms