Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Atp2a1Q8R429 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm15374-201ENSMUST00000119313 844 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm11700-201ENSMUST00000119409 403 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm15549-201ENSMUST00000121595 622 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm29410-201ENSMUST00000188383 694 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm5996-201ENSMUST00000211110 718 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Cog3-203ENSMUST00000227473 4197 ntBASIC12.81□□□□□ -0.36
Atp2a1Q8R429 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Gm25492-201ENSMUST00000157383 129 ntBASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Mir6407-201ENSMUST00000184510 101 ntBASIC12.8□□□□□ -0.36
Atp2a1Q8R429 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Gm3619-201ENSMUST00000219947 775 ntBASIC12.8□□□□□ -0.36
Atp2a1Q8R429 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp2a1Q8R429 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms