Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm7851-201ENSMUST00000117574 323 ntBASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gm12579-201ENSMUST00000118040 783 ntBASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gm11941-201ENSMUST00000119904 610 ntBASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gm15566-201ENSMUST00000121130 590 ntBASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Mir6927-201ENSMUST00000184494 71 ntBASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim29Q8R2Q0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.08□□□□□ -0.31
Trim29Q8R2Q0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Trim29Q8R2Q0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim29Q8R2Q0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gm23200-201ENSMUST00000104379 132 ntBASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gm13809-201ENSMUST00000117921 597 ntBASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim29Q8R2Q0 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Gm8459-201ENSMUST00000162504 760 ntBASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim29Q8R2Q0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms