Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.68□□□□□ -0.86
Nhlrc3Q8CCH2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm22133-201ENSMUST00000102082 109 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm12742-201ENSMUST00000117326 410 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm13392-201ENSMUST00000117708 150 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm3329-201ENSMUST00000159873 556 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm38117-201ENSMUST00000194653 939 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm6334-201ENSMUST00000207083 228 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm44651-201ENSMUST00000207343 372 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 AC159896.2-201ENSMUST00000214753 269 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm25857-201ENSMUST00000082788 129 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nhlrc3Q8CCH2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Gm4310-201ENSMUST00000177847 889 ntBASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nhlrc3Q8CCH2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms