Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm45433-201ENSMUST00000209386 247 ntBASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc40Q8BI79 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc40Q8BI79 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc40Q8BI79 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Gm11960-201ENSMUST00000122068 925 ntBASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Gm44262-201ENSMUST00000204969 372 ntBASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Gm270-201ENSMUST00000223010 976 ntBASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Ccdc40Q8BI79 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Gm13126-201ENSMUST00000117079 3063 ntBASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Gm37666-201ENSMUST00000194110 866 ntBASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Gm38314-201ENSMUST00000195709 625 ntBASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Rps4l-202ENSMUST00000204242 789 ntBASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc40Q8BI79 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc40Q8BI79 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc40Q8BI79 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc40Q8BI79 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc40Q8BI79 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc40Q8BI79 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc40Q8BI79 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc40Q8BI79 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc40Q8BI79 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc40Q8BI79 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms