Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm26013-201ENSMUST00000104404 119 ntBASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm12795-201ENSMUST00000117594 539 ntBASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm16397-201ENSMUST00000122201 494 ntBASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm5982-201ENSMUST00000196234 512 ntBASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm42518-201ENSMUST00000196277 938 ntBASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm44315-201ENSMUST00000203041 219 ntBASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Gm10752-201ENSMUST00000218348 729 ntBASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh8Q7TSK3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Pcdh8Q7TSK3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm14942-201ENSMUST00000119642 336 ntBASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm10807-201ENSMUST00000177134 795 ntBASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm7741-201ENSMUST00000181445 989 ntBASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Mir6998-201ENSMUST00000183343 64 ntBASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm38210-201ENSMUST00000191944 809 ntBASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm42657-201ENSMUST00000201746 211 ntBASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.33□□□□□ -0.6
Pcdh8Q7TSK3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms