Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm14193-201ENSMUST00000105067 153 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm15549-201ENSMUST00000121595 622 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm29499-201ENSMUST00000189151 486 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm28329-201ENSMUST00000191208 689 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm29171-201ENSMUST00000191397 486 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm5996-201ENSMUST00000211110 718 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm29787-201ENSMUST00000222129 849 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp49Q6P9L4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Gm22920-201ENSMUST00000102175 109 ntBASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Gm12247-201ENSMUST00000117585 670 ntBASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.79□□□□□ -0.36
Usp49Q6P9L4 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Gm5523-201ENSMUST00000180415 997 ntBASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Gm8959-201ENSMUST00000213150 571 ntBASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Ginm1-202ENSMUST00000065124 300 ntBASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp49Q6P9L4 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms