Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Krt39Q6IFX4 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Krt39Q6IFX4 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gm12463-201ENSMUST00000118271 849 ntBASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.64□□□□□ -0.39
Krt39Q6IFX4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gm27530-201ENSMUST00000184096 98 ntBASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gm45113-201ENSMUST00000207518 165 ntBASIC12.64□□□□□ -0.39
Krt39Q6IFX4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt39Q6IFX4 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms