Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Gm15617-201ENSMUST00000118973 771 ntBASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm12218-201ENSMUST00000117666 399 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm15528-201ENSMUST00000117821 864 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Mir7051-201ENSMUST00000184167 73 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm29067-201ENSMUST00000190821 470 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm2875-201ENSMUST00000211333 360 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Btrc-209ENSMUST00000224478 2194 ntBASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vps54Q5SPW0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Gm12899-201ENSMUST00000120565 551 ntBASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.71□□□□□ -0.21
Vps54Q5SPW0 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Gm24992-201ENSMUST00000157412 130 ntBASIC13.71□□□□□ -0.21
Vps54Q5SPW0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Gm8420-201ENSMUST00000097103 598 ntBASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps54Q5SPW0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps54Q5SPW0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps54Q5SPW0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms