Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC7.81□□□□□ -1.16
Cops9Q3U898 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Gm45161-201ENSMUST00000207316 2263 ntBASIC7.81□□□□□ -1.16
Cops9Q3U898 AC125409.1-201ENSMUST00000223213 3370 ntBASIC7.81□□□□□ -1.16
Cops9Q3U898 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Gm13612-201ENSMUST00000119276 390 ntBASIC7.81□□□□□ -1.16
Cops9Q3U898 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Gm45195-201ENSMUST00000205597 1008 ntBASIC7.81□□□□□ -1.16
Cops9Q3U898 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Gm32025-201ENSMUST00000217960 307 ntBASIC7.81□□□□□ -1.16
Cops9Q3U898 Gm22058-201ENSMUST00000083393 310 ntBASIC7.81□□□□□ -1.16
Cops9Q3U898 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC7.81□□□□□ -1.16
Cops9Q3U898 AC126257.1-201ENSMUST00000213195 1536 ntBASIC7.81□□□□□ -1.16
Cops9Q3U898 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC7.81□□□□□ -1.16
Cops9Q3U898 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cops9Q3U898 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Cops9Q3U898 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Ehmt1-204ENSMUST00000114418 4902 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Rprl1-201ENSMUST00000158050 327 ntBASIC7.8□□□□□ -1.16
Cops9Q3U898 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC7.8□□□□□ -1.16
Cops9Q3U898 Gm4857-201ENSMUST00000192718 785 ntBASIC7.8□□□□□ -1.16
Cops9Q3U898 Gm18187-201ENSMUST00000196476 984 ntBASIC7.8□□□□□ -1.16
Cops9Q3U898 Gm2213-201ENSMUST00000197485 688 ntBASIC7.8□□□□□ -1.16
Cops9Q3U898 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cops9Q3U898 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Gm2673-201ENSMUST00000120958 1608 ntBASIC7.8□□□□□ -1.16
Cops9Q3U898 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Cops9Q3U898 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cops9Q3U898 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms