Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm14723-201ENSMUST00000118686 215 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm15711-201ENSMUST00000118889 535 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cul4aQ3TCH7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Gm38271-201ENSMUST00000192296 1603 ntBASIC12□□□□□ -0.49
Cul4aQ3TCH7 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Gm9353-201ENSMUST00000200472 604 ntBASIC12□□□□□ -0.49
Cul4aQ3TCH7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12□□□□□ -0.49
Cul4aQ3TCH7 Gm7783-201ENSMUST00000204795 781 ntBASIC12□□□□□ -0.49
Cul4aQ3TCH7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12□□□□□ -0.49
Cul4aQ3TCH7 AC164437.3-201ENSMUST00000228323 347 ntBASIC12□□□□□ -0.49
Cul4aQ3TCH7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Gm43482-201ENSMUST00000202797 1861 ntBASIC12□□□□□ -0.49
Cul4aQ3TCH7 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cul4aQ3TCH7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms