Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Olfml3-204ENSMUST00000169286 874 ntBASIC12.99□□□□□ -0.33
GabpaQ00422 Gm18776-201ENSMUST00000188833 654 ntBASIC12.99□□□□□ -0.33
GabpaQ00422 Gm19587-201ENSMUST00000191395 545 ntBASIC12.99□□□□□ -0.33
GabpaQ00422 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm7082-201ENSMUST00000209880 969 ntBASIC12.99□□□□□ -0.33
GabpaQ00422 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.99□□□□□ -0.33
GabpaQ00422 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.99□□□□□ -0.33
GabpaQ00422 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
GabpaQ00422 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GabpaQ00422 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
GabpaQ00422 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.99□□□□□ -0.33
GabpaQ00422 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
GabpaQ00422 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.98□□□□□ -0.33
GabpaQ00422 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.98□□□□□ -0.33
GabpaQ00422 Gm22379-201ENSMUST00000157480 131 ntBASIC12.98□□□□□ -0.33
GabpaQ00422 Gm8723-201ENSMUST00000166076 820 ntBASIC12.98□□□□□ -0.33
GabpaQ00422 Gm8701-201ENSMUST00000169259 874 ntBASIC12.98□□□□□ -0.33
GabpaQ00422 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GabpaQ00422 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GabpaQ00422 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GabpaQ00422 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GabpaQ00422 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GabpaQ00422 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GabpaQ00422 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.97□□□□□ -0.33
GabpaQ00422 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Gm25053-201ENSMUST00000103982 133 ntBASIC12.97□□□□□ -0.33
GabpaQ00422 Gm25922-201ENSMUST00000104281 130 ntBASIC12.97□□□□□ -0.33
GabpaQ00422 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
GabpaQ00422 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GabpaQ00422 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Gm24679-201ENSMUST00000158762 111 ntBASIC12.97□□□□□ -0.33
GabpaQ00422 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.97□□□□□ -0.33
GabpaQ00422 Gm9081-201ENSMUST00000182346 991 ntBASIC12.97□□□□□ -0.33
GabpaQ00422 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GabpaQ00422 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Gm25053-202ENSMUST00000199731 132 ntBASIC12.97□□□□□ -0.33
GabpaQ00422 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.97□□□□□ -0.33
GabpaQ00422 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
GabpaQ00422 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
GabpaQ00422 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GabpaQ00422 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.97□□□□□ -0.33
GabpaQ00422 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GabpaQ00422 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.97□□□□□ -0.33
GabpaQ00422 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
GabpaQ00422 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms