Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
Otx1P80205 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Otx1P80205 Gm22711-201ENSMUST00000116890 133 ntBASIC9.91□□□□□ -0.82
Otx1P80205 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.91□□□□□ -0.82
Otx1P80205 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Otx1P80205 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Gm6905-201ENSMUST00000205729 511 ntBASIC9.91□□□□□ -0.82
Otx1P80205 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.91□□□□□ -0.82
Otx1P80205 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.91□□□□□ -0.82
Otx1P80205 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.91□□□□□ -0.82
Otx1P80205 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.91□□□□□ -0.82
Otx1P80205 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.91□□□□□ -0.82
Otx1P80205 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.91□□□□□ -0.82
Otx1P80205 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Otx1P80205 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.9□□□□□ -0.82
Otx1P80205 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.9□□□□□ -0.82
Otx1P80205 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.9□□□□□ -0.82
Otx1P80205 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Gm9062-201ENSMUST00000117712 727 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Gm12407-201ENSMUST00000180219 324 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Gm9211-201ENSMUST00000182882 975 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.9□□□□□ -0.82
Otx1P80205 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.9□□□□□ -0.82
Otx1P80205 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.9□□□□□ -0.82
Otx1P80205 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.9□□□□□ -0.82
Otx1P80205 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.9□□□□□ -0.82
Otx1P80205 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Otx1P80205 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Otx1P80205 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.9□□□□□ -0.82
Otx1P80205 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Otx1P80205 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Otx1P80205 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Otx1P80205 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Otx1P80205 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Otx1P80205 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Otx1P80205 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Otx1P80205 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Otx1P80205 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Otx1P80205 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms