Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm11989-201ENSMUST00000117240 672 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm11511-201ENSMUST00000118146 540 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm11362-201ENSMUST00000118838 850 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sf3b6P59708 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Mir8093-201ENSMUST00000185043 137 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm36982-201ENSMUST00000193796 1128 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm5982-201ENSMUST00000196234 512 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm30285-201ENSMUST00000214614 422 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC10.19□□□□□ -0.78
Sf3b6P59708 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Gm26226-201ENSMUST00000082509 116 ntBASIC10.19□□□□□ -0.78
Sf3b6P59708 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sf3b6P59708 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sf3b6P59708 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.18□□□□□ -0.78
Sf3b6P59708 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Gm14726-201ENSMUST00000120623 896 ntBASIC10.18□□□□□ -0.78
Sf3b6P59708 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.18□□□□□ -0.78
Sf3b6P59708 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC10.18□□□□□ -0.78
Sf3b6P59708 Gm31256-201ENSMUST00000194705 506 ntBASIC10.18□□□□□ -0.78
Sf3b6P59708 Gm43758-201ENSMUST00000199500 367 ntBASIC10.18□□□□□ -0.78
Sf3b6P59708 Gm8956-201ENSMUST00000203939 825 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms