Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC17.37■□□□□ 0.37
Cux1P53564 Gm43460-201ENSMUST00000202491 1057 ntBASIC17.37■□□□□ 0.37
Cux1P53564 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC17.37■□□□□ 0.37
Cux1P53564 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC17.37■□□□□ 0.37
Cux1P53564 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux1P53564 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux1P53564 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cux1P53564 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC17.36■□□□□ 0.37
Cux1P53564 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC17.36■□□□□ 0.37
Cux1P53564 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Cux1P53564 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cux1P53564 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Gm5764-201ENSMUST00000118817 885 ntBASIC17.36■□□□□ 0.37
Cux1P53564 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Gm8601-201ENSMUST00000182096 909 ntBASIC17.36■□□□□ 0.37
Cux1P53564 Gm7985-201ENSMUST00000183329 981 ntBASIC17.36■□□□□ 0.37
Cux1P53564 Gm43244-201ENSMUST00000196994 1285 ntBASIC17.36■□□□□ 0.37
Cux1P53564 Gm8234-201ENSMUST00000198523 1107 ntBASIC17.36■□□□□ 0.37
Cux1P53564 Gm8170-201ENSMUST00000218581 945 ntBASIC17.36■□□□□ 0.37
Cux1P53564 CT025689.1-201ENSMUST00000225214 283 ntBASIC17.36■□□□□ 0.37
Cux1P53564 AC134793.1-202ENSMUST00000227444 803 ntBASIC17.36■□□□□ 0.37
Cux1P53564 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux1P53564 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cux1P53564 AC167022.1-201ENSMUST00000218647 1458 ntBASIC17.35■□□□□ 0.37
Cux1P53564 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cux1P53564 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cux1P53564 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Gm44806-201ENSMUST00000205574 2303 ntBASIC17.35■□□□□ 0.37
Cux1P53564 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Gm15625-201ENSMUST00000117617 1093 ntBASIC17.35■□□□□ 0.37
Cux1P53564 Gm8019-201ENSMUST00000119317 587 ntBASIC17.35■□□□□ 0.37
Cux1P53564 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Gm24078-201ENSMUST00000158184 103 ntBASIC17.35■□□□□ 0.37
Cux1P53564 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cux1P53564 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.35■□□□□ 0.37
Cux1P53564 AC102569.1-201ENSMUST00000221563 685 ntBASIC17.35■□□□□ 0.37
Cux1P53564 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cux1P53564 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cux1P53564 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC17.35■□□□□ 0.37
Cux1P53564 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux1P53564 Gm18806-201ENSMUST00000207607 1775 ntBASIC17.34■□□□□ 0.37
Cux1P53564 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.34■□□□□ 0.37
Cux1P53564 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cux1P53564 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Gm15707-201ENSMUST00000118804 996 ntBASIC17.34■□□□□ 0.37
Cux1P53564 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC17.34■□□□□ 0.37
Cux1P53564 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC17.34■□□□□ 0.37
Cux1P53564 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cux1P53564 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cux1P53564 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC17.34■□□□□ 0.37
Cux1P53564 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC17.34■□□□□ 0.37
Cux1P53564 CT030195.2-201ENSMUST00000226074 1286 ntBASIC17.34■□□□□ 0.37
Cux1P53564 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux1P53564 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cux1P53564 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms