Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Prox1P48437 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Prox1P48437 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.01□□□□□ -0.65
Prox1P48437 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Gm12164-201ENSMUST00000121695 551 ntBASIC11.01□□□□□ -0.65
Prox1P48437 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.01□□□□□ -0.65
Prox1P48437 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Gm26956-201ENSMUST00000182176 986 ntBASIC11.01□□□□□ -0.65
Prox1P48437 Gm37489-201ENSMUST00000191883 159 ntBASIC11.01□□□□□ -0.65
Prox1P48437 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.01□□□□□ -0.65
Prox1P48437 Gm9368-201ENSMUST00000219348 831 ntBASIC11.01□□□□□ -0.65
Prox1P48437 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.01□□□□□ -0.65
Prox1P48437 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Gm10312-201ENSMUST00000078515 489 ntBASIC11.01□□□□□ -0.65
Prox1P48437 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Prox1P48437 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Prox1P48437 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.01□□□□□ -0.65
Prox1P48437 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Prox1P48437 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.01□□□□□ -0.65
Prox1P48437 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prox1P48437 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Prox1P48437 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11□□□□□ -0.65
Prox1P48437 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11□□□□□ -0.65
Prox1P48437 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Gm12799-201ENSMUST00000118151 2560 ntBASIC11□□□□□ -0.65
Prox1P48437 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Gm11989-201ENSMUST00000117240 672 ntBASIC11□□□□□ -0.65
Prox1P48437 Gm12241-201ENSMUST00000118330 726 ntBASIC11□□□□□ -0.65
Prox1P48437 Gm11362-201ENSMUST00000118838 850 ntBASIC11□□□□□ -0.65
Prox1P48437 Gm11793-201ENSMUST00000120433 981 ntBASIC11□□□□□ -0.65
Prox1P48437 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Gm27516-201ENSMUST00000184237 98 ntBASIC11□□□□□ -0.65
Prox1P48437 Gm9230-201ENSMUST00000188228 532 ntBASIC11□□□□□ -0.65
Prox1P48437 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11□□□□□ -0.65
Prox1P48437 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Gm37348-201ENSMUST00000193104 1789 ntBASIC11□□□□□ -0.65
Prox1P48437 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
Prox1P48437 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Prox1P48437 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11□□□□□ -0.65
Prox1P48437 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prox1P48437 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Prox1P48437 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Prox1P48437 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Prox1P48437 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Prox1P48437 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms