Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Fen1P39749 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Fen1P39749 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Fen1P39749 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.52□□□□□ -0.56
Fen1P39749 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Fen1P39749 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Fen1P39749 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.52□□□□□ -0.56
Fen1P39749 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Fen1P39749 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.52□□□□□ -0.56
Fen1P39749 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Fen1P39749 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Fen1P39749 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Fen1P39749 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Fen1P39749 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Fen1P39749 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.52□□□□□ -0.57
Fen1P39749 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Fen1P39749 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.52□□□□□ -0.57
Fen1P39749 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Gm14381-201ENSMUST00000122105 414 ntBASIC11.52□□□□□ -0.57
Fen1P39749 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Fen1P39749 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Gm2991-201ENSMUST00000173338 480 ntBASIC11.52□□□□□ -0.57
Fen1P39749 Gm27320-201ENSMUST00000184892 109 ntBASIC11.52□□□□□ -0.57
Fen1P39749 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.52□□□□□ -0.57
Fen1P39749 Gm43758-201ENSMUST00000199500 367 ntBASIC11.52□□□□□ -0.57
Fen1P39749 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.52□□□□□ -0.57
Fen1P39749 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.52□□□□□ -0.57
Fen1P39749 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.52□□□□□ -0.57
Fen1P39749 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.52□□□□□ -0.57
Fen1P39749 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Fen1P39749 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Fen1P39749 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Fen1P39749 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fen1P39749 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Fen1P39749 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Fen1P39749 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Fen1P39749 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Fen1P39749 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Fen1P39749 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Fen1P39749 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.51□□□□□ -0.57
Fen1P39749 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Gm26083-201ENSMUST00000157904 193 ntBASIC11.51□□□□□ -0.57
Fen1P39749 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.51□□□□□ -0.57
Fen1P39749 Gm9192-201ENSMUST00000183221 985 ntBASIC11.51□□□□□ -0.57
Fen1P39749 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.51□□□□□ -0.57
Fen1P39749 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.51□□□□□ -0.57
Fen1P39749 Gm45865-201ENSMUST00000211815 945 ntBASIC11.51□□□□□ -0.57
Fen1P39749 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.51□□□□□ -0.57
Fen1P39749 Gm10312-201ENSMUST00000078515 489 ntBASIC11.51□□□□□ -0.57
Fen1P39749 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Fen1P39749 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fen1P39749 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms