Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.05□□□□□ -0.96
Rom1P32958 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Rom1P32958 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rom1P32958 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.04□□□□□ -0.96
Rom1P32958 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Rom1P32958 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.04□□□□□ -0.96
Rom1P32958 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm28937-201ENSMUST00000185413 695 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm29400-201ENSMUST00000187208 695 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm28662-201ENSMUST00000188446 695 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm28251-201ENSMUST00000188835 695 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm37318-201ENSMUST00000194325 695 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm38017-201ENSMUST00000194768 695 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm37287-201ENSMUST00000195449 695 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm37793-201ENSMUST00000195548 695 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm6745-201ENSMUST00000199216 526 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm6450-201ENSMUST00000200896 574 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC9.04□□□□□ -0.96
Rom1P32958 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rom1P32958 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.04□□□□□ -0.96
Rom1P32958 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Rom1P32958 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.04□□□□□ -0.96
Rom1P32958 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Rom1P32958 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.04□□□□□ -0.96
Rom1P32958 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rom1P32958 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.03□□□□□ -0.96
Rom1P32958 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.03□□□□□ -0.96
Rom1P32958 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Rom1P32958 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rom1P32958 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms