Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.87□□□□□ -0.83
Slc6a1P31648 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.87□□□□□ -0.83
Slc6a1P31648 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.87□□□□□ -0.83
Slc6a1P31648 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.87□□□□□ -0.83
Slc6a1P31648 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Gm37597-201ENSMUST00000191853 382 ntBASIC9.87□□□□□ -0.83
Slc6a1P31648 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.87□□□□□ -0.83
Slc6a1P31648 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.87□□□□□ -0.83
Slc6a1P31648 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Gm10608-202ENSMUST00000213924 676 ntBASIC9.87□□□□□ -0.83
Slc6a1P31648 Gm45930-201ENSMUST00000221330 292 ntBASIC9.87□□□□□ -0.83
Slc6a1P31648 Morn2-202ENSMUST00000227729 656 ntBASIC9.87□□□□□ -0.83
Slc6a1P31648 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Slc6a1P31648 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Slc6a1P31648 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Slc6a1P31648 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Slc6a1P31648 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Slc6a1P31648 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Slc6a1P31648 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Slc6a1P31648 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.86□□□□□ -0.83
Slc6a1P31648 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC9.86□□□□□ -0.83
Slc6a1P31648 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.86□□□□□ -0.83
Slc6a1P31648 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Gm13350-201ENSMUST00000120519 479 ntBASIC9.86□□□□□ -0.83
Slc6a1P31648 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.86□□□□□ -0.83
Slc6a1P31648 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Slc6a1P31648 Gm25668-201ENSMUST00000157700 129 ntBASIC9.86□□□□□ -0.83
Slc6a1P31648 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Slc6a1P31648 Gm20482-202ENSMUST00000174729 825 ntBASIC9.86□□□□□ -0.83
Slc6a1P31648 Gm6114-201ENSMUST00000182472 968 ntBASIC9.86□□□□□ -0.83
Slc6a1P31648 Gm38000-201ENSMUST00000192390 1215 ntBASIC9.86□□□□□ -0.83
Slc6a1P31648 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.86□□□□□ -0.83
Slc6a1P31648 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms