Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf9P20334 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf9P20334 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf9P20334 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Tnfrsf9P20334 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf9P20334 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf9P20334 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gm12015-201ENSMUST00000117065 843 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gm8018-201ENSMUST00000173536 789 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gm43952-201ENSMUST00000203765 751 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gm10297-201ENSMUST00000207136 651 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gm45259-201ENSMUST00000209217 1006 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 AC153899.1-201ENSMUST00000214092 1117 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 CT009754.4-201ENSMUST00000221430 565 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 AC131743.3-201ENSMUST00000222099 662 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gm1821-202ENSMUST00000227415 750 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Sp3-201ENSMUST00000066003 3808 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 4933415A04Rik-201ENSMUST00000056256 2009 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf9P20334 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Mir669l-201ENSMUST00000103771 98 ntBASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Gm22693-201ENSMUST00000175049 442 ntBASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.69□□□□□ -0.86
Tnfrsf9P20334 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms