Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.15□□□□□ -0.46
TnfP06804 Gm24992-201ENSMUST00000157412 130 ntBASIC12.15□□□□□ -0.46
TnfP06804 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Mir6407-201ENSMUST00000184510 101 ntBASIC12.15□□□□□ -0.46
TnfP06804 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TnfP06804 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.15□□□□□ -0.46
TnfP06804 Gm29067-201ENSMUST00000190821 470 ntBASIC12.15□□□□□ -0.46
TnfP06804 Gm3793-201ENSMUST00000204973 672 ntBASIC12.15□□□□□ -0.46
TnfP06804 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.15□□□□□ -0.46
TnfP06804 Gm9139-201ENSMUST00000218817 700 ntBASIC12.15□□□□□ -0.46
TnfP06804 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.15□□□□□ -0.46
TnfP06804 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TnfP06804 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TnfP06804 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TnfP06804 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TnfP06804 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TnfP06804 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.15□□□□□ -0.46
TnfP06804 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.15□□□□□ -0.47
TnfP06804 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
TnfP06804 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.15□□□□□ -0.47
TnfP06804 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TnfP06804 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TnfP06804 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.14□□□□□ -0.47
TnfP06804 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TnfP06804 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.14□□□□□ -0.47
TnfP06804 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.14□□□□□ -0.47
TnfP06804 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TnfP06804 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.14□□□□□ -0.47
TnfP06804 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.14□□□□□ -0.47
TnfP06804 Gm6407-201ENSMUST00000176468 549 ntBASIC12.14□□□□□ -0.47
TnfP06804 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TnfP06804 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TnfP06804 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TnfP06804 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TnfP06804 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Gm43380-201ENSMUST00000200421 220 ntBASIC12.14□□□□□ -0.47
TnfP06804 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.14□□□□□ -0.47
TnfP06804 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.14□□□□□ -0.47
TnfP06804 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.14□□□□□ -0.47
TnfP06804 Mt1-202ENSMUST00000211807 1085 ntBASIC12.14□□□□□ -0.47
TnfP06804 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.14□□□□□ -0.47
TnfP06804 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TnfP06804 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.14□□□□□ -0.47
TnfP06804 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TnfP06804 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TnfP06804 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
TnfP06804 Gm12218-201ENSMUST00000117666 399 ntBASIC12.13□□□□□ -0.47
TnfP06804 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.13□□□□□ -0.47
TnfP06804 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Gm29155-201ENSMUST00000185910 269 ntBASIC12.13□□□□□ -0.47
TnfP06804 Gm8197-202ENSMUST00000193422 934 ntBASIC12.13□□□□□ -0.47
TnfP06804 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.13□□□□□ -0.47
TnfP06804 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.13□□□□□ -0.47
TnfP06804 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TnfP06804 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms