Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.54□□□□□ -0.56
Chrna4O70174 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Chrna4O70174 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.54□□□□□ -0.56
Chrna4O70174 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.54□□□□□ -0.56
Chrna4O70174 Gm15549-201ENSMUST00000121595 622 ntBASIC11.54□□□□□ -0.56
Chrna4O70174 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Mir7686-201ENSMUST00000200604 57 ntBASIC11.54□□□□□ -0.56
Chrna4O70174 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Chrna4O70174 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.54□□□□□ -0.56
Chrna4O70174 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Spcs1-203ENSMUST00000226374 592 ntBASIC11.54□□□□□ -0.56
Chrna4O70174 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.54□□□□□ -0.56
Chrna4O70174 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Chrna4O70174 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.54□□□□□ -0.56
Chrna4O70174 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Chrna4O70174 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chrna4O70174 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 B9d1os-201ENSMUST00000137010 674 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Gm7666-201ENSMUST00000146631 819 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm22144-201ENSMUST00000157402 102 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm8574-201ENSMUST00000203207 924 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm8342-201ENSMUST00000209839 757 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Chrna4O70174 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.53□□□□□ -0.56
Chrna4O70174 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chrna4O70174 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.53□□□□□ -0.56
Chrna4O70174 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chrna4O70174 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chrna4O70174 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chrna4O70174 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms