Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tcof1O08784 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tcof1O08784 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.41□□□□□ -0.26
Tcof1O08784 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tcof1O08784 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tcof1O08784 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tcof1O08784 Gm11451-201ENSMUST00000118946 630 ntBASIC13.4□□□□□ -0.26
Tcof1O08784 Gm12899-201ENSMUST00000120565 551 ntBASIC13.4□□□□□ -0.26
Tcof1O08784 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Gm25492-201ENSMUST00000157383 129 ntBASIC13.4□□□□□ -0.26
Tcof1O08784 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.4□□□□□ -0.26
Tcof1O08784 Gm29155-201ENSMUST00000185910 269 ntBASIC13.4□□□□□ -0.26
Tcof1O08784 Gm28388-201ENSMUST00000186262 437 ntBASIC13.4□□□□□ -0.26
Tcof1O08784 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tcof1O08784 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Tcof1O08784 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.4□□□□□ -0.26
Tcof1O08784 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.4□□□□□ -0.26
Tcof1O08784 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.4□□□□□ -0.26
Tcof1O08784 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tcof1O08784 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tcof1O08784 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tcof1O08784 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tcof1O08784 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tcof1O08784 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tcof1O08784 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tcof1O08784 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.39□□□□□ -0.27
Tcof1O08784 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm11675-201ENSMUST00000121873 832 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm8492-201ENSMUST00000182375 987 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm44008-201ENSMUST00000204345 412 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm10254-201ENSMUST00000052888 867 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tcof1O08784 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Erich3-203ENSMUST00000189969 3460 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.39□□□□□ -0.27
Tcof1O08784 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tcof1O08784 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Tcof1O08784 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.39□□□□□ -0.27
Tcof1O08784 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm14395-201ENSMUST00000120494 563 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Gm1848-201ENSMUST00000120711 789 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.39□□□□□ -0.27
Tcof1O08784 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tcof1O08784 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.39□□□□□ -0.27
Tcof1O08784 Gm42657-201ENSMUST00000201746 211 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.39□□□□□ -0.27
Tcof1O08784 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms