Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc180J3QNE4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc180J3QNE4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc180J3QNE4 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC20.64■□□□□ 0.9
Ccdc180J3QNE4 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC20.64■□□□□ 0.9
Ccdc180J3QNE4 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc180J3QNE4 Gm8420-201ENSMUST00000097103 598 ntBASIC20.64■□□□□ 0.9
Ccdc180J3QNE4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Rubie-203ENSMUST00000227803 2430 ntBASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Gm37542-201ENSMUST00000192563 2832 ntBASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Gm23745-201ENSMUST00000104230 125 ntBASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc180J3QNE4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Gm15519-201ENSMUST00000120088 1566 ntBASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Gm6758-201ENSMUST00000119643 1055 ntBASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Gm18010-201ENSMUST00000203553 202 ntBASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 AC154435.1-201ENSMUST00000223938 959 ntBASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 AC154759.1-201ENSMUST00000224137 1159 ntBASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Arhgef33-207ENSMUST00000224966 490 ntBASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 AC137871.1-201ENSMUST00000228278 475 ntBASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc180J3QNE4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Ighv13-1-201ENSMUST00000103480 294 ntBASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Gm25604-201ENSMUST00000158359 133 ntBASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Gm42498-201ENSMUST00000199981 1372 ntBASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc180J3QNE4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Gm14113-201ENSMUST00000121399 976 ntBASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms