Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Gm23949-201ENSMUST00000104027 127 ntBASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Gm12380-201ENSMUST00000119012 544 ntBASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Gm8566-201ENSMUST00000120174 465 ntBASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Gm45186-201ENSMUST00000206874 478 ntBASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Gm8385-201ENSMUST00000058999 643 ntBASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh9F8VPK8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm7003-201ENSMUST00000195089 312 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm6867-201ENSMUST00000219165 425 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh9F8VPK8 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms