Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm37197-201ENSMUST00000195607 401 ntBASIC10.3□□□□□ -0.76
Shank1D3YZU1 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.3□□□□□ -0.76
Shank1D3YZU1 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Shank1D3YZU1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.3□□□□□ -0.76
Shank1D3YZU1 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Shank1D3YZU1 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Shank1D3YZU1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm12389-201ENSMUST00000117696 418 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm5599-201ENSMUST00000209602 788 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm18035-201ENSMUST00000211962 589 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm11996-201ENSMUST00000117538 915 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm13204-201ENSMUST00000120110 821 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm6606-201ENSMUST00000193613 947 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Shank1D3YZU1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.29□□□□□ -0.76
Shank1D3YZU1 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Shank1D3YZU1 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Mir432-201ENSMUST00000157230 75 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm25492-201ENSMUST00000157383 129 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm9162-201ENSMUST00000182081 991 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm43249-201ENSMUST00000200464 458 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm43506-201ENSMUST00000200675 753 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm2448-201ENSMUST00000207080 559 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms