Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm24255-201ENSMUST00000104481 128 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm29615-201ENSMUST00000185371 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm28224-201ENSMUST00000186078 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm29001-201ENSMUST00000186177 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm28292-201ENSMUST00000186593 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm28101-201ENSMUST00000187608 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm29076-201ENSMUST00000187689 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm28302-201ENSMUST00000187931 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm28646-201ENSMUST00000188220 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm28205-201ENSMUST00000189177 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm29032-201ENSMUST00000189797 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm28695-201ENSMUST00000190300 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm37448-201ENSMUST00000192795 697 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 AA914427-201ENSMUST00000193194 1166 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm43966-201ENSMUST00000203301 612 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Erich3-203ENSMUST00000189969 3460 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.34□□□□□ -0.75
H2afb3S4R1G7 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afb3S4R1G7 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.75
H2afb3S4R1G7 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
H2afb3S4R1G7 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Gm11500-201ENSMUST00000118237 601 ntBASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Gm26361-201ENSMUST00000158868 186 ntBASIC10.33□□□□□ -0.76
H2afb3S4R1G7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Mir8109-201ENSMUST00000184375 117 ntBASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Gm38117-201ENSMUST00000194653 939 ntBASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms