Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Gm13117-201ENSMUST00000120894 691 ntBASIC12.46□□□□□ -0.41
Trim54Q9ERP3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Gm5468-202ENSMUST00000227851 682 ntBASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim54Q9ERP3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trim54Q9ERP3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim54Q9ERP3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim54Q9ERP3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim54Q9ERP3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm25880-201ENSMUST00000104331 132 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm14892-201ENSMUST00000117636 267 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm12030-201ENSMUST00000121917 223 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm26134-201ENSMUST00000178484 110 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim54Q9ERP3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gm13422-201ENSMUST00000118834 504 ntBASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gm11700-201ENSMUST00000119409 403 ntBASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gm12990-201ENSMUST00000120372 468 ntBASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gm38314-201ENSMUST00000195709 625 ntBASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gm10263-201ENSMUST00000085163 300 ntBASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim54Q9ERP3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms