Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm22711-201ENSMUST00000116890 133 ntBASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm7150-201ENSMUST00000122032 981 ntBASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm15881-201ENSMUST00000148792 942 ntBASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.01□□□□□ -0.65
Otud1Q9CUB6 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm17831-201ENSMUST00000205579 900 ntBASIC11.01□□□□□ -0.65
Otud1Q9CUB6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Gm44554-201ENSMUST00000208738 147 ntBASIC11.01□□□□□ -0.65
Otud1Q9CUB6 AC132104.1-201ENSMUST00000213615 260 ntBASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Otud1Q9CUB6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm15131-201ENSMUST00000119124 595 ntBASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm12029-201ENSMUST00000120073 832 ntBASIC11□□□□□ -0.65
Otud1Q9CUB6 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm37845-201ENSMUST00000194977 355 ntBASIC11□□□□□ -0.65
Otud1Q9CUB6 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm38314-201ENSMUST00000195709 625 ntBASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm44845-201ENSMUST00000208773 335 ntBASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm45701-201ENSMUST00000212049 235 ntBASIC11□□□□□ -0.65
Otud1Q9CUB6 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11□□□□□ -0.65
Otud1Q9CUB6 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 AC134439.1-201ENSMUST00000220923 600 ntBASIC11□□□□□ -0.65
Otud1Q9CUB6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Otud1Q9CUB6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms