Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Gm8285-201ENSMUST00000208293 759 ntBASIC12.89□□□□□ -0.35
Smc1aQ9CU62 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm11628-201ENSMUST00000117568 171 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm17391-201ENSMUST00000171036 126 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm5733-201ENSMUST00000190232 939 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Ginm1-202ENSMUST00000065124 300 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smc1aQ9CU62 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms