Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm9062-201ENSMUST00000117712 727 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm3329-201ENSMUST00000159873 556 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Mir5120-201ENSMUST00000175020 78 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm12407-201ENSMUST00000180219 324 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm10774-201ENSMUST00000188689 204 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Spcs1-203ENSMUST00000226374 592 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Ginm1-202ENSMUST00000065124 300 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpa3Q9CQ71 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gm14193-201ENSMUST00000105067 153 ntBASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gm12165-201ENSMUST00000117047 342 ntBASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gm37835-201ENSMUST00000193305 361 ntBASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gm44506-201ENSMUST00000206278 965 ntBASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpa3Q9CQ71 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms