Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm12501-201ENSMUST00000119163 529 ntBASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm20495-201ENSMUST00000173902 235 ntBASIC13.08□□□□□ -0.32
Trim11Q99PQ2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm44044-201ENSMUST00000205178 1089 ntBASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm21811-201ENSMUST00000096485 930 ntBASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Gm45251-201ENSMUST00000209486 1465 ntBASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim11Q99PQ2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.07□□□□□ -0.32
Trim11Q99PQ2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm14208-201ENSMUST00000119645 678 ntBASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm13263-201ENSMUST00000121271 838 ntBASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm14017-201ENSMUST00000121934 386 ntBASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm7150-201ENSMUST00000122032 981 ntBASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm23085-201ENSMUST00000157849 293 ntBASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm45186-201ENSMUST00000206874 478 ntBASIC13.07□□□□□ -0.32
Trim11Q99PQ2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim11Q99PQ2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Btrc-209ENSMUST00000224478 2194 ntBASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim11Q99PQ2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms