Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.53□□□□□ -0.56
Trim33Q99PP7 Gm8185-201ENSMUST00000160999 669 ntBASIC11.53□□□□□ -0.56
Trim33Q99PP7 Gm16505-201ENSMUST00000179981 232 ntBASIC11.53□□□□□ -0.56
Trim33Q99PP7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Gm45657-201ENSMUST00000211318 1349 ntBASIC11.53□□□□□ -0.56
Trim33Q99PP7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim33Q99PP7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim33Q99PP7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gm25881-201ENSMUST00000157783 103 ntBASIC11.52□□□□□ -0.57
Trim33Q99PP7 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gm4310-201ENSMUST00000177847 889 ntBASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Mir6927-201ENSMUST00000184494 71 ntBASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gm38117-201ENSMUST00000194653 939 ntBASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.52□□□□□ -0.57
Trim33Q99PP7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.52□□□□□ -0.57
Trim33Q99PP7 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.52□□□□□ -0.57
Trim33Q99PP7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim33Q99PP7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Gm15515-201ENSMUST00000117827 822 ntBASIC11.51□□□□□ -0.57
Trim33Q99PP7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Gm45394-201ENSMUST00000209240 1175 ntBASIC11.51□□□□□ -0.57
Trim33Q99PP7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms