Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh15Q99PJ1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Fam220-ps-201ENSMUST00000116535 783 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm7255-201ENSMUST00000187371 908 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm8557-201ENSMUST00000220777 475 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 AC153153.1-201ENSMUST00000225803 793 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm16477-201ENSMUST00000085365 801 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm17415-201ENSMUST00000096427 789 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm22763-201ENSMUST00000158374 107 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm18164-201ENSMUST00000213769 927 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Gm18166-201ENSMUST00000215557 927 ntBASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh15Q99PJ1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Gm6517-201ENSMUST00000121056 511 ntBASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms