Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trex1Q91XB0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.11□□□□□ -0.31
Trex1Q91XB0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.11□□□□□ -0.31
Trex1Q91XB0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Gm17889-201ENSMUST00000198410 598 ntBASIC13.11□□□□□ -0.31
Trex1Q91XB0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.11□□□□□ -0.31
Trex1Q91XB0 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trex1Q91XB0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm24791-201ENSMUST00000104284 131 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm25343-201ENSMUST00000157460 107 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trex1Q91XB0 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm6423-201ENSMUST00000204315 934 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm6390-201ENSMUST00000215034 589 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.1□□□□□ -0.31
Trex1Q91XB0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms