Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
Nup35Q8R4R6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
Nup35Q8R4R6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
Nup35Q8R4R6 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Gm26286-201ENSMUST00000104166 134 ntBASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Gm13226-201ENSMUST00000117838 404 ntBASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.33□□□□□ -0.92
Nup35Q8R4R6 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.33□□□□□ -0.92
Nup35Q8R4R6 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Gm5705-201ENSMUST00000066241 711 ntBASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup35Q8R4R6 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.32□□□□□ -0.92
Nup35Q8R4R6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gm26956-201ENSMUST00000182176 986 ntBASIC9.32□□□□□ -0.92
Nup35Q8R4R6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms