Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gm5257-201ENSMUST00000121823 790 ntBASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gm8451-201ENSMUST00000170338 447 ntBASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 AC134248.1-201ENSMUST00000216113 1176 ntBASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 AC130477.1-201ENSMUST00000226982 420 ntBASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gm7536-201ENSMUST00000077389 444 ntBASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gm5453-201ENSMUST00000080866 447 ntBASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp7Q8R1T1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Olfml3-204ENSMUST00000169286 874 ntBASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Gm44216-201ENSMUST00000203942 157 ntBASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 CT030166.5-201ENSMUST00000222249 420 ntBASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp7Q8R1T1 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Gm13284-201ENSMUST00000121020 547 ntBASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms