Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm15374-201ENSMUST00000119313 844 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm12030-201ENSMUST00000121917 223 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm44008-201ENSMUST00000204345 412 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm30671-201ENSMUST00000214898 318 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm3619-201ENSMUST00000219947 775 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm6407-201ENSMUST00000176468 549 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm43380-201ENSMUST00000200421 220 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm35960-201ENSMUST00000202712 767 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm45120-201ENSMUST00000208880 408 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sh3rf2Q8BZT2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms