Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Snrnp40Q6PE01 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm23612-201ENSMUST00000103823 110 ntBASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm13981-201ENSMUST00000122360 447 ntBASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm23576-201ENSMUST00000179918 110 ntBASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Arhgef33-207ENSMUST00000224966 490 ntBASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Snrnp40Q6PE01 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm13039-201ENSMUST00000118638 794 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms