Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd3Q6P9Z1 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm13296-201ENSMUST00000117854 997 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm44364-201ENSMUST00000198368 141 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm43966-201ENSMUST00000203301 612 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm45865-201ENSMUST00000211815 945 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Olfr582-201ENSMUST00000098212 960 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd3Q6P9Z1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Gm11500-201ENSMUST00000118237 601 ntBASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Gm4157-201ENSMUST00000211647 679 ntBASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms